Scientists usually study the molecular machinery that controls gene expression from the perspective of a linear, two-dimensional genome—even though DNA and its bound proteins function in three ...

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Nucleotide-binding proteins are proteins that bind to nucleotides. For example, kinases bind adenosine triphosphate (ATP) and G proteins bind guanosine triphosphate (GTP). Other nucleotide-binding ...

Abstract: Predicting binding affinity between biomolecules is a critical task in drug discovery, where deep learning methods have achieved significant progress. However, many existing approaches ...